◆发表论文
1.Jinyang Yu, Hanjun Liu, Yonggang Deng, Petri Penttinen, Zuyu Wang, Yihao Liu, Yan Wang, Entao Wang, Yu Sun, Keming Chen, Hui Li, Liyun Chen, Xiumei Yu, Ke Zhao, Yunfu Gu, Min Huang, Lingzi Zhang, Quanju Xiang, Menggen Ma, Qiang Chen. Chelativorans petroleitrophicus sp. nov., a paraffin oil-degrading bacterium isolated from a mixture of oil-based drill cuttings and paddy soil. International Journal of Systematic and Evolutionary Microbiology, 2023, 73(3). doi: 10.1099/ijsem.0.005769.
2.Xiaoxu Shen, Can Cui, Shuyue Tang, Shunshun Han, Yao Zhang, Lu Xia, Bo Tan, Menggen Ma, Houyang Kang, Jie Yu, Qing Zhu, Huadong Yin. MyoG-enhanced circGPD2 regulates chicken skeletal muscle development by targeting miR-203a. International Journal of Biological Macromolecules, 2022, 222(Pt B):2212?2224.
3.Xiumei Yu, Muhammad Shoaib, Xiran Cheng, Yongliang Cui, Sajad Hussain, Jing Yan, Jie Zhou, Qiang Chen , Yunfu Gu , Likou Zou, Xinyu Zhang, Sidi Hao, Ke Zhao, Menggen Ma, Quanju Xiang, Shuangcheng Li, Ting Zou. Role of rhizobia in promoting non-enzymatic antioxidants to mitigate nitrogen-deficiency and nickel stresses in Pongamia pinnata. Ecotoxicology and Environmental Safety, 2022, 241:113789.
4.Quanju Xiang, Huijuan Zhang, Xiaoqian Chen, Shiyao Hou, Yunfu Gu, Xiumei Yu, Ke Zhao, Xiaoping Zhang, Menggen Ma, Qiang Chen, Penttinen Petri, Xiaoqiong Chen. Enhanced effects of iron on mycelial growth, metabolism and in vitro antioxidant activity of polysaccharides from Lentinula edodes. Bioengineering (Basel), 2022, 9(10):581.
5.Qinyao Wei, Huiqing Xue, Congjiao Sun, Juan Li, Haorong He, Felix Kwame Amevor, Bo Tan, Menggen Ma, Kai Tian, Zhichao Zhang, Yao Zhang, Hua He, Lu Xia, Qing Zhu, Huadong Yin, Can Cui. Gga-miR-146b-3p promotes apoptosis and attenuate autophagy by targeting AKT1 in chicken granulosa cells. Theriogenology, 2022, 190:52-64.
6.Xiumei Yu, Min Yan, Yongliang Cui, Zhongyi Liu, Han Liu, Jie Zhou, Jiahao Liu, Lan Zeng, Qiang Chen, Yunfu Gu, Likou Zou, Ke Zhao, Quanju Xiang, Menggen Ma, Shuangcheng Li. Effects of co-application of cadmium-immobilizing bacteria and organic fertilizers on Houttuynia cordata and microbial communities in a cadmium-contaminated field. Frontiers in Microbiology, 2022, 12:809834.
7.Haorong He , Dongmei Li, Yongtong Tian, Qinyao Wei, Felix Kwame Amevor, Congjiao Sun, Chunlin Yu, Chaowu Yang, Huarui Du, Xiaosong Jiang, Menggen Ma, Can Cui, Zhichao Zhang, Kai Tian, Yao Zhang, Qing Zhu, Huadong Yin. miRNA sequencing analysis of healthy and atretic follicles of chickens revealed that miR-30a-5p inhibits granulosa cell death via targeting Beclin1. Journal of Animal Science and Biotechnology, 2022, 13(1):55.
8.Yihao Liu, Jinyang Yu, Zuyu Wang, Petri Penttinen, Xiumei Yu, Ke Zhao, Menggen Ma, Quanju Xiang, Yunfu Gu, Hanjun Liu, Xiaoping Zhang, Qiang Chen. Bio-matrix pot addition enhanced the vegetation process of iron tailings by Pennisetum giganteum. Frontiers in Microbiology, 2022, 13:825660.
9.Quanju Xiang, Juntao Zhang, Xiying Huang, Menggen Ma, Ke Zhao, Xiumei Yu, Qiang Chen, Xiaoping Zhang, Petri Penttinen, Yunfu Gu. Changes in the taxonomic and functional structures of microbial communities during vegetable waste mixed silage fermentation. Canadian Journal of Microbiology, 2022, 68(4):281-293.
10.Shunshun Han, Can Cui, Xiyu Zhao, Yao Zhang, Yun Zhang, Jing Zhao, Xiaoxu Shen, Haorong He, Jianping Wang, Menggen Ma, Diyan Li, Qing Zhu, Huadong Yin. Filamin C regulates skeletal muscle atrophy by stabilizing dishevelled-2 to inhibit autophagy and mitophagy. Molecular Therapy-Nucleic Acids, 2021, 27:147-164.
11.Xiying Huang, Runji Zhang, Qinyan Yang, Xinzhu Li, Quanju Xiang, Ke Zhao, Menggen Ma, Xiumei Yu, Qiang Chen, Xianfu Zeng, Lujun Zhang, Petri Penttinen, Yunfu Gu. Cultivating Lentinula edodes on substrate containing composted sawdust affects the expression of carbohydrate and aromatic amino acid metabolism-related genes. mSystems, 202, 7(1):e0082721.
12.Sami Ullah Khan, Rizwan Aslam, Muhammad Ashraf, Sultan Ali, Muhammad Saqib, Muhammad Arshad Khattak, Umer Sadique Khattak, Haq Amanullah, Hastari Wuryastuty, R Wasito, Aris Haryanto, Farman Ullah, Menggen Ma, Sardar Ali. Prevalence of antibiotic resistance pattern in shigella isolates procured from pediatric patients at Faisalabad – Pakistan. Pakistan Journal of Pharmaceautic Sciences, 2022, 35(1):41-48.
13.Shunshun Han, Jianping Wang, Can Cui, Chunlin Yu, Yao Zhang, Diyan Li, Menggen Ma, Huarui Du, Xiaosong Jiang, Qing Zhu, Chaowu Yang, Huadong Yin. Fibromodulin is involved in autophagy and apoptosis of granulosa cells affecting the follicular atresia in chicken. Poultry Science, 2022, 101(1):101524.
14.Xiaoxu Shen, Yuanhang Wei, Wei Liu, Guishuang You, Shuyue Tang, Zhenyu Su, Mingxin Du, Jian He, Jing Zhao, Yongtong Tian, Yao Zhang, Menggen Ma, Qing Zhu, Huadong Yin. A novel circular RNA circITSN2 targets the miR-218-5p/LMO7 axis to promote chicken embryonic myoblast proliferation and differentiation. Frontiers in Cell and Developmental Biology, 2021, 9:748844.
15.Yuanhang Wei, Yongtong Tian, Xinyan Li, Felix Kwame Amevor, Xiaoxu Shen, Jing Zhao, Xiyu Zhao, Xinyi Zhang, Wenling Huang, Jihong Hu, Jie Yi, Lei Yan, Yao Zhang, Diyan Li, Menggen Ma, Qing Zhu, Huadong Yin. Circular RNA circFNDC3AL upregulates BCL9 expression to promote chicken skeletal muscle satellite cells proliferation and differentiation by binding to miR-204. Frontiers in Cell and Developmental Biology, 2021, 9:736749.
16.Xiaoxu Shen, Yuanhang Wei, Guishuang You, Wei Liu, Felix Kwame Amevor, Yao Zhang, Haorong He, Menggen Ma, Yun Zhang, Diyan Li, Qing Zhu, Huadong Yin. Circular PPP1R13B RNA promotes chicken skeletal muscle satellite cell proliferation and differentiation via targeting miR-9-5p. Animals (Basel), 2021, 11(8):2396.
17.Muhammad Shoaib, Sajad Hussain, Xiran Cheng, Yongliang Cui, Han Liu, Qiang Chen, Menggen Ma, Yunfu Gu, Ke Zhao, Quanju Xiang, Jie Zhou, Jiahao Liu, Shuangcheng Li, Ting Zou, Xiumei Yu. Synergistic anti-oxidative effects of Pongamia pinnata against nickel mediated by Rhizobium pisi and Ochrobacterium pseudogrignonense. Ecotoxicology and Environmental Safety, 2021, 217:112244.
18.Yingyan Wang, Yulan Chen, Qinyu Xue, Quanju Xiang, Ke Zhao, Xiumei Yu, Qiang Chen, Menggen Ma, Hao Jiang, Xiaoping Zhang, Petri Penttinen, Yunfu Gu. The abundance of the nifH gene became higher and the nifH-containing diazotrophic bacterial communities changed during primary succession in the hailuogou glacier chronosequence, China. Frontiers in Microbiology, 2021, 12:672656.
19.Haorong He, Huadong Yin, Xueke Yu, Yao Zhang, Menggen Ma, Diyan Li, Qing Zhu. PDLIM5 affects chicken skeletal muscle satellite cell proliferation and differentiation via the p38-MAPK pathway. Animals (Basel), 2021, 11(4):1016.
20.Yifeng Zhu, Heng Wang, Jianping Wang, Shunshun Han, Yao Zhang, Menggen Ma, Qing Zhu, Keying Zhang, Huadong Yin. Zearalenone induces apoptosis and cytoprotective autophagy in chicken granulosa cells by PI3K-AKT-mTOR and MAPK signaling pathways. Toxins (Basel), 2021, 13(3):199.
21.Yidan Ouyang, Qian Li, Xiaolin Kuang, Hanyu Wang, Jinjian Wu, Ellen Ayepa, Huan Chen, Getachew Tafere Abrha, Zhengyue Zhang, Xi Li, Menggen Ma. YMR152W from Saccharomyces cerevisiae encoding a novel aldehyde reductase for detoxification of aldehydes derived from lignocellulosic biomass. Journal of Bioscience and Bioengineering, 2021, 131(1):39-46.
22.Hanjun Liu, Lirong Chen, En T. Wang, Yihao Liu, Lingzi Zhang, Ke Zhao, Yunfu Gu, Xiumei Yu, Menggen Ma, Petri Penttinen, Xiaoping Zhang, Min Huang, Liangji Deng, Qiang Chen. Combined microbial consortium inoculation and black locust planting is effective in the bioremediation of waste drill cuttings. Frontiers in Microbiology, 2020, 11:536787.
23.Xia Kang, Yongliang Cui, Tian Shen, Min Yan, Weiguo Tu, Muhammad Shoaib, Quanju Xiang, Ke Zhao, Yunfu Gu, Qiang Chen, Shuangcheng Li, Yueyang Liang, Menggen Ma, Likou Zou, Xiumei Yu. Changes of root microbial populations of natively grown plants during natural attenuation of V-Ti magnetite tailings. Ecotoxicology and Environmental Safety, 2020, 201:110816.
24.Xiaolin Kuang, Yidan Ouyang, Yaping Guo, Qian Li, Hanyu Wang, Getachew Tarere Abrha, Ellen Ayepa, Yunfu Gu, Xi Li, Qiang Chen, Menggen Ma. New insights into two yeast BDHs from the PDH subfamily as aldehyde reductases in context of detoxification of lignocellulosic aldehyde inhibitors. Applied Microbiology and Biotechnology, 2020, 104(15):6679?6692.
25.Yan Bai, Quanju Xiang, Ke Zhao, Xiumei Yu, Qiang Chen, Menggen Ma, Hao Jiang, Xiaoping Zhang, Petri Penttinen, Yunfu Gu. Plant and soil development cooperatively shaped the composition of the phoD-harboring bacterial community along the primary succession in the Hailuogou glacier chronosequence. mSystems, 2020, 5(4):e00475-20.
26.Xiangdong Hu, Xuebing Han, Lan Wu, Hanyu Wang, Yidan Ouyang, Qian Li, Xiaolin Kuang, Quanju Xiang, Xiumei Yu, Xi Li, Yunfu Gu, Ke Zhao, Qiang Chen, Menggen Ma. The open reading frame 02797 from Candida tropicalis encodes a novel NADH-dependent aldehyde reductase. Protein Expression and Purification, 2020, 171:105625.
27.Xuebing Han, Xiangdong Hu, Chang Zhou, Hanyu Wang, Qian Li, Yidan Ouyang, Xiaolin Kuang, Difan Xiao, Quanju Xiang, Xiumei Yu, Xi Li, Yunfu Gu, Ke Zhao, Qiang Chen, Menggen Ma. Cloning and functional characterization of xylitol dehydrogenase genes from Issatchenkia orientalis and Torulaspora delbrueckii. Journal of Bioscience and Bioengineering, 2020, 130(1):29-35.
28.Jing Li, Xiaoyue Zhang, Lin Xiao, Ke Liu, Yue Li, Ziwei Zhang, Qiang Chen, Xiaolin Ao, Decong Liao, Yunfu Gu, Menggen Ma, Xiumei Yu, Quanju Xiang, Ji Chen, Xiaoping Zhang, Tao Yang, Petri Penttinen, Ke Zhao. Changes in soil microbial communities at Jinsha earthen site are associated with earthen site deterioration. BMC Microbiology, 2020, 20(1):147.
29.Hanyu Wang, Qian Li, Yuanyuan Peng, Zhengyue Zhang, Xiaolin Kuang, Xiangdong Hu, Ellen Ayepa, Xuebing Han, Getachew Tafere Abrha, Quanju Xiang, Xiumei Yu, Ke Zhao, Likou Zou, Yunfu Gu, Xi Li, Xiaoying Li, Qiang Chen, Xiaoping Zhang, Beidong Liu, Menggen Ma. Cellular analysis and comparative transcriptomics reveal the tolerance mechanisms of Candida tropicalis toward phenol. Frontiers in Microbiology, 2020, 11:544.
30.Z Lewis Liu, Menggen Ma. Pathway-based signature transcriptional profiles as tolerance phenotypes for the adapted industrial yeast Saccharomyces cerevisiae resistant to furfural and HMF. Applied Microbiology and Biotechnology, 2020, 104(8):3473-3492.
31.Bilal Adil, Quanju Xiang, Maolan He, Yuetong Wu, Muhammad Ahsan Asghar, Muhammad Arshad, Peng Qin, Yunfu Gu, Xiumei Yu, Ke Zhao, Xiaoping Zhang, Menggen Ma, Qiang Chen, Xiaoqiong Chen, Yanhong Yan. Effect of sodium and calcium on polysaccharide production and the activities of enzymes involved in the polysaccharide synthesis of Lentinus edodes. AMB Express, 2020, 10(1):47.
32.Quanju Xiang, Jie Wang, Peng Qin, Bilal Adil, Kaiwei Xu, Yunfu Gu, Xiumei Yu, Ke Zhao, Xiaoping Zhang, Menggen Ma, Qiang Chen, Xiaoqiong Chen, Yanhong Yan. Effect of common bean seed exudates on growth, lipopolysaccharide production, and lipopolysaccharide transport gene expression of Rhizobium anhuiense. Canadian Journal of Microbiology, 2020, 66(3):186-193.
33.Xiumei Yu, Xia Kang, Yanmei Li, Yongliang Cui, Weiguo Tu, Tian Shen, Min Yan, Yunfu Gu, Likou Zou, Menggen Ma, Quanju Xiang, Ke Zhao, Yueyang Liang, Xiaoping Zhang, Qiang Chen. Rhizobia population was favoured during in situ phytoremediation of vanadium-titanium magnetite mine tailings dam using Pongamia pinnata. Environmental Pollution, 2019, 255(Pt 1):113167.
34.Peng Qin, Yuetong Wu, Bilal Adil, Jie Wang, Yunfu Gu, Xiumei Yu, Ke Zhao, Xiaoping Zhang, Menggen Ma, Qiang Chen, Xiaoqiong Chen, Zongjin Zhang, Quanju Xiang. Optimization of laccase from Ganoderma lucidum cecolorizing remazol brilliant blue R and glac1 as main laccase-contributing gene. Molecules, 2019, 24(21):3914.
35.Hanyu Wang, Qian Li, Zhengyue Zhang, Chang Zhou, Ellen Ayepa, Getachew Tafere Abrha, Xuebing Han, Xiangdong Hu, Xiumei Yu, Quanju Xiang, Xi Li, Yunfu Gu, Ke Zhao, Chengcheng Xie, Qiang Chen, Menggen Ma. YKL107W from Saccharomyces cerevisiae encodes a novel aldehyde reductase for detoxification of acetaldehyde, glycolaldehyde, and furfural. Applied Microbiology and Biotechnology, 2019, 103(14):5699?5713.
36.Hanyu Wang, Qian Li, Xiaolin Kuang, Difan Xiao, Xuebing Han, Xiangdong Hu, Xi Li, Menggen Ma. Functions of aldehyde reductases from Saccharomyces cerevisiae in detoxification of aldehyde inhibitors and their biotechnological applications. Applied Microbiology and Biotechnology, 2018, 102(24):10439?10456.
37.Xia Kang, Xiumei Yu, Yu Zhang, Yongliang Cui, Weiguo Tu, Qiongyao Wang, Yanmei Li, Lanfang Hu, Yunfu Gu, Ke Zhao, Quanju Xiang, Qiang Chen, Menggen Ma, Likou Zou, Xiaoping Zhang, Jinsan Kang. Inoculation of Sinorhizobium saheli YH1 leads to reduced metal uptake for Leucaena leucocephala grown in mine tailings and metal-polluted soils. Frontiers in Microbiology, 2018, 9:1853.
38.Ke Zhao, Jing Li, Meiling Shen, Qiang Che, Maoke Liu, Xiaolin Ao, Decong Liao, Yunfu Gu, Kaiwei Xu, Menggen Ma, Xiumei Yu, Quanju Xiang, Ji Chen, Xiaoping Zhang, Petri Penttinen. Actinobacteria associated with Chinaberry tree are diverse and show antimicrobial activity. Scientific Reports, 2018, 8(1):11103.
39.Quanju Xiang, Jin Li, Peng Qin, Maolan He, Xiumei Yu, Ke Zhao, Xiaoping Zhang, Menggen Ma, Qiang Chen, Xiaoqiong Chen, Xianfu Zeng, Yunfu Gu. Identification and evaluation of reference genes for qRT-PCR studies in Lentinula edodes. PLoS One, 2018, 13(1):e0190226.
40.Mei Long, Hua Yu, Li Chen, Guoyan Wu, Siyue Zhao, Wenwen Deng, Shujuan Chen, Kang Zhou, Shuliang Liu, Li He, Xiaoling Ao, Yubao Yan, Menggen Ma, Hongning Wang, Margaret A Davis, Lisa Jones, Bei Li, Anyun Zhang, Likou Zou. Recovery of Salmonella isolated from eggs and the commercial layer farms. Gut Pathogens, 2017, 9:74.
41.Hanyu Wang, Yidan Ouyang, Chang Zhou, Difan Xiao, Yaping Guo, Lan Wu, Xi Li, Yunfu Gu, Quanju Xiang, Ke Zhao, Xiumei Yu, Likou Zou, Menggen Ma. YKL071W from Saccharomyces cerevisiae encodes a novel aldehyde reductase for detoxification of glycolaldehyde and furfural derived from lignocellulose. Applied Microbiology and Biotechnology, 2017, 101(23?24):8405?8418.
42.Xu Wang, Z. Lewis Liu, Xiaoping Zhang, Menggen Ma. A new source of resistance to 2-furaldehyde from Scheffersomyces (Pichia) stipitis for sustainable lignocellulose-to-biofuel conversion. Applied Microbiology and Biotechnology, 2017, 101(12):4981?4993.
43.Xu Wang, Menggen Ma, Z. Lewis Liu, Quanju Xiang, Xi Li, Na Liu, Xiaoping Zhang. GRE2 from Scheffersomyces stipitis as an aldehyde reductase contributes tolerance to aldehyde inhibitors derived from lignocellulosic biomass. Applied Microbiology and Biotechnology, 2016, 100(15):6671?6682.
44.Xianxian Zhao, Juan Tang, Xu Wang, Ruoheng Yang, Xiaoping Zhang, Yunfu Gu, Xi Li, Menggen Ma. YNL134C from Saccharomyces cerevisiae encodes a novel protein with aldehyde reductase activity for detoxification of furfural derived from lignocellulosic biomass. Yeast, 2015, 32(5):409?422.
45.Xi Li, Ruoheng Yang, Menggen Ma, Xu Wang, Juan Tang, Xianxian Zhao, Xiaoping Zhang. A novel aldehyde reductase encoded by YML131W from Saccharomyces cerevisiae confers tolerance to furfural derived from lignocellulosic biomass conversion. Bioenergy Research, 2015, 8(1):119?129.
46.赵鲜仙, 周玚, 张思伟, 王琳璐, 路亚婷, 马孟根*(责任作者). ADH7启动子精细调控表达MSN2酿酒酵母菌株对糠醛耐受的研究. 微生物学通报, 2015, 42(10):1903?1911.
47.Menggen Ma, Xu Wang, Xiaoping Zhang, Xianxian Zhao. Alcohol dehydrogenases from Scheffersomyces stipitis involved in the detoxification of aldehyde inhibitors derived from lignocellulosic biomass conversion. Applied Microbiology and Biotechnology, 2013, 97(18):8411?8425.
48.Z. Lewis Liu, Jaewoong Moon, Menggen Ma, Patricia J. Slininger. New genotypes of industrial yeast Saccharomyces cerevisiae engineered with YXI and heterologous xylose transporters improve xylose utilization and ethanol production. Biocatalysis and Agricultural Biotechnology, 2013, 2(3):247?254.
49.Menggen Ma, Z. Lewis Liu, Jaewoong Moon. Genetic engineering of inhibitor-tolerant Saccharomyces cerevisiae for improved xylose utilization in ethanol production. Bioenergy Research, 2012, 5(2):459?469.
50.Menggen Ma and Z. Lewis Liu. Comparative transcriptome profiling analyses during the lag phase uncover YAP1, PDR1, PDR3, RPN4, and HSF1 as key regulatory genes in genomic adaptation to the lignocellulose derived inhibitor HMF for Saccharomyces cerevisiae. BMC Genomics, 2010, 11: 660.
51.Menggen Ma and Z. Lewis Liu. Quantitative transcription dynamic analysis reveals candidate genes and key regulators for ethanol tolerance in Saccharomyces cerevisiae. BMC Microbiology, 2010, 10:169.
52.Menggen Ma and Z. Lewis Liu. Mechanisms of ethanol tolerance in Saccharomyces cerevisiae. Applied Microbiology and Biotechnology, 2010, 87(3):829?845.
53.Z. Lewis Liu, Menggen Ma, Mingzhou Song. Evolutionarily engineered ethanologenic yeast detoxifies lignocellulosic biomass conversion inhibitors by reprogrammed pathways. Molecular Genetics and Genomics, 2009, 282(3):233?244.
54.Z. Lewis Liu, Debra E. Palmquist, Menggen Ma, Jiangbo Liu, Nancy J. Alexander. Application of a master equation for quantitative mRNA analysis using qRT-PCR. Journal of Biotechnology, 2009, 143(1):10?16.
55.Menggen Ma, Hongning Wang, Yong Yu, Dong Zhang, Shigui Liu. Detection of antimicrobial resistance genes of pathogenic Salmonella from swine with DNA microarray. Journal of Veterinary Diagnostic Investigation, 2007, 19(2):161?167.