◆发表论文
1)Zhongfu Yang#, Gang Nie#, Guangyan Feng, Xiaoheng Xu, Dandan Li, Xia Wang, Linkai Huang*, Xinquan Zhang*. Genome-wide identification of MADS-box gene family in orchardgrass and the positive role of DgMADS114 and DgMADS115 under different abiotic stress. International Journal of Biological Macromolecules, 2022, 223:129-142. Doi: https://doi.org/10.1016/j.ijbiomac.2022.11.027. (SCI收录 一区TOP IF=8.025)
2)Yongqun Zhu1,?, Zongchao Liao2,?, Jian Yang2, Haotian Ye2, Chongyang Han2, WenZhi Xu1 and Gang Nie2,*. Genotypic and Phenotypic Diversity of Heat Tolerance among and within Perennial Ryegrass (Lolium perenne L.), Brazilian Journal of Botany, https://doi.org/10.1007/s40415- 022-00854-9 (IF=1.368, JCR Q3区)
3)Jiayi Chen?, Qifan Ran?, Zhongfu Yang, Ying Zhou, Zhihang Yuan, Huiqi Lai, Jing Wang, Gang Nie* and Yongqun Zhu*. Genome-wide identification and expression profile of the HD-Zip transcription factor family associated with seed germination and abiotic stress response in Miscanthus sinensis. Genes, https://doi.org/10.3390/genes13122256 (IF=4.141, JCR Q2, 中科院大类3区)
4)Jinwan Fan#, Gang Nie#, Jieyu Ma, Ruchang Hu, Jie He, Feifei Wu, Zhongfu Yang, Sainan Ma, Xin Zhang, and Xinquan Zhang*. The Identification and Characterization of the KNOX Gene Family as an Active Regulator of Leaf Development in Trifolium repens Genes (Basel), 2022, 13(10), 1778; Doi: 10.3390/genes13101778. (SCI收录IF=4.141，JCRQ2，中科院大类分区3区)
5)Sainan Ma?, Ruchang Hu?, Jieyu Ma, Jinwan Fan, Feifei Wu, Yang Wang, Linkai Huang, Guangyan Feng, Dandan Li, Gang Nie*, Xinquan Zhang*, Integrative analysis of the metabolome and transcriptome provides insights into the mechanisms of anthocyanins and proanthocyanidins biosynthesis in Trifolium repens, Industrial Crops and Products, (2022), doi: https://doi.org/10.1016/j.indcrop.2022.115529. （第一标注：国家现代牧草产业技术体系（CARS-34）；第二标注：第二标注四川省自然科学基金（2022NSFSC1619）, 第三标注四川省十四五育种攻关(2021YFYZ0013)），(中科院大类分区一区TOP， IF=6.449)
6)Jieyu Ma#, Gang Nie#, Zhongfu Yang, Sainan Ma, Jinwan Fan, Ruchang Hu, Feifei Wu, and Xinquan Zhang*. Genome-Wide Identification, Characterization, and Expression Profiling Analysis of SPL Gene Family during the Inflorescence Development in Trifolium repens Genes (Basel), 2022, 18;13(5):900. Doi: 10.3390/genes13050900. (中科院大类分区3区，IF=4.141)
7)Sainan Ma#, Zhongfu Yang#, Feifei Wu, Jieyu Ma, Jinwan Fan, Xintan Dong, Ruchang Hu, Guangyan Feng, Dandan Li, Xia Wang, Gang Nie*, Xinquan Zhang* R2R3-MYB gene family: Genome-wide identification provides insight to improve the content of proanthocyanidins in Trifolium repens Gene, 2022, 30;829:146523. Doi: 10.1016/j.gene.2022.146523. (中科院大类分区3区，IF=3.913)
8)Feifei Wu, Jinwan Fan, Xiuwen Ye, Lili Yang, Ruchang Hu, Jieyu Ma, Sainan Ma, Dandan Li, Jiqiong Zhou, Gang Nie*, Xinquan Zhang* Unraveling Cadmium Toxicity in Trifolium repens L. Seedling: Insight into Regulatory Mechanisms Using Comparative Transcriptomics Combined with Physiological Analyses Int J Mol Sci, 2022, 21;23(9):4612. Doi: 10.3390/ijms23094612. (Q1, 中科院大类分区2区，IF=6.208)
9)Gang Nie#, Jie Zhou#, Yiwei Jiang, Jie He, Yang Wang, Zongchao Liao, Charlotte Appiah, Dandan Li,Guangyan Feng, Linkai Huang, Xia Wang* and Xinquan Zhang*. Transcriptome characterization of candidate genes for heat tolerance in perennial ryegrass after exogenous methyl Jasmonate application BMC Plant Biology, 2022, 22:68. Doi: 10.1186/s12870-021-03412-9 (Q1, 中科院大类分区2区，IF＝4.215)
10)Gang Nie#, Zhongfu Yang#, Jie He #, Aiyu Liu, Jiayi Chen, Shuan Wang, Xia Wang, Guangyan Feng, Dandan Li, Yan Peng, Linkai Huang, Xinquan Zhang*. Genome-Wide Investigation of the NAC Transcription Factor Family in Miscanthus sinensis and Expression Analysis Under Various Abiotic Stress. Front. Plant Sci, 2021, 12:766550. doi: 10.3389/fpls.2021.766550（IF=5.753, 中科院分区TOP期刊）
11)Feifei Wu#, Sainan Ma#, Jie Zhou, Chongyang Han, Ruchang Hu, Xinying Yang, Gang Nie*, Xinquan Zhang*. Genetic diversity and population structure analysis in a large collection of white clover (Trifolium repens L.) germplasm worldwide. PeerJ, 2021. doi:10.7717/peerj.11325 (JCR Q2, IF=2.379)
12)Gang Nie#, Minyi Zhong#, Jiabang Cai, Xinying Yang, Jie Zhou, Charlotte Appiah, Mingyu Tang, Xia Wang, Guangyan Feng, Linkai Huang, Xinquan Zhang*. Transcriptome characterization of candidate genes related to chromium uptake, transport and accumulation in Miscanthus sinensis. Ecotoxicology and Environmental Safety, 2021, 112: 112445. doi:10.1016/j.ecoenv.2021.112445 (JCR Q1, IF=6.291, 中科院分区TOP期刊)
13)Gang Nie#, Zongchao Liao#, Mingyi Zhong, Jie Zhou, Jiabang Cai, Aiyu Liu, Xia Wang, Xinquan Zhang*. MicroRNA-Mediated Responses to Chromium Stress Provide Insight Into Tolerance Characteristics of Miscanthus sinensis. Frontiers in Plant Science, 2021, 12: 666117. doi:10.3389/fpls.2021.666117 (IF=5.753, 中科院分区TOP期刊)
14)Yanning Su#, Yizhi Huang#, Xintan Dong, Ruijia Wang, Minyu Tang, Jiabang Cai, Jiayi Chen, Xinquan Zhang*, Gang Nie*. Exogenous Methyl Jasmonate Improves Heat Tolerance of Perennial Ryegrass through Alteration of Osmotic Adjustment, Antioxidant Defense, and Expression of JA Responsive Genes. Frontiers in Plant Science, 2021, 12: 665. doi: 10.3389/fpls.2021.664519 （IF=5.753, 中科院分区TOP期刊）
15)Zongfu Yang#, Gang Nie#, Guangyan Feng, Jiating Han, Linkai Huang, Xinquan Zhang*. Genome-wide identification, characterization, and expression analysis of the NAC transcription factor family in orchardgrass (Dactylis glomerata L.). BMC Genomics, 2021, 22: 178. doi: 10.1186/s12864-021-07485-6. (IF=3.675, 中科院分区大区TOP期刊)
16)Xiongwei Zhao, Gang Nie, Yanyu Yao, Zhongjie Ji, Jianhua Gao, Xingchun Wang, Yiwei Jiang*. Natural variation and genomic prediction of growth, physiological traits, and nitrogen-use efficiency in perennial ryegrass under low-nitrogen stress. Journal of Experimental Botany, 2020, 71(20): 6670-6683. doi: 10.1093/jxb/eraa388. (JCR Q1, IF=6.992, 中科院分区大区TOP期刊)
17)Sainan Ma#, Chongyang Han#, Jie Zhou, Ruchang Hu, Xing Jiang, Feifei Wu, Ke Tian, Gang Nie*, Xinquan Zhang*. Fingerprint identification of white clover cultivars based on SSR molecular markers, Mol Biol Rep 2020, 47: 8513-8521. doi: 10.1007/s11033-020-05893-7.第一标注国家科技创新体系项目(No.CARS-34)，第二标注自然基金 (2017FY100602) (JCR Q4, IF=1.402)
18)Gang Nie#, Xinying Yang#, Zhongfu Yang, Minyi Zhong, Yongqun Zhu, Jie Zhou, Charlotte Appiah, Zongchao Liao, Guangyan Feng, and Xinquan Zhang*. Genome-wide investigation of the NAC transcript factor family in perennial ryegrass (Lolium perenne L.) and expression analysis under various abiotic stressor. Genomics, 2020, 4224-4231. doi: 10.1016/j.ygeno.2020.06.033 (JCR=Q1, IF=6.205)
19)Minyi Zhong#, Xinying Yang#, Yiyue Hu, Linkai Huang, Yan Peng, Zhou Li, Qiuxu Liu, Xia Wang, Xinquan Zhang* and Gang Nie*. Identification of candidate reference genes for quantitative RT-PCR in Miscanthus sinensis subjected to various abiotic stresses. Mol Biol Rep, 2020, 47: 2913–2927. doi: 10.1007/s11033-020-05392-9 (JCR Q3, IF=2.11)
20)Charlotte Appiah, Zhongfu Yang, Jie He, Yang Wang, Jie Zhou, Wenzhi Xu, Gang Nie*, Yongqun Zhu*, Genome-Wide Identification of Hsp90 Gene Family in Perennial Ryegrass and Expression Analysis under Various Abiotic Stresses. Plants, 2021, 10: 2509. (JCR Q1, IF=3.935)
21)Gang Nie#, Ting Huang#, Xiao Ma, Linkai Huang, Yan Peng, Yanhong Yan, Zhou Li, Xia Wang, Xinquan Zhang*. Genetic variability evaluation and cultivar identification of tetraploid annual ryegrass using SSR markers. Peer J, 2019, 5: e7742. doi: 10.7717/peerj.7742 (JCR Q2, IF=2.353)
22)Gang Nie, Linkai Huang, Xiao Ma, Zhongjie Ji, Yajie Zhang, Lu Tang, Xinquan Zhang*. Enriching Genomic Resources and Transcriptional Profile Analysis of Miscanthus sinensis under Drought Stress Based on RNA Sequencing. International Journal of Genomics, 2017, 9184731. doi: 10.1155/2017/9184731 (JCR Q4, IF=2.402)
23)Zhongfu Yang#, Gang Nie#, Ling Pan, Yan Zhang, Linkai Huang, Xiao Ma and Xinquan Zhang*. Development and validation of near-infrared spectroscopy for the prediction of forage quality parameters in Lolium multiflorum. Peer J, 2017, 5: e3867. doi: 10.7717/peerj.3867 （JCR Q3, IF=2.177）
24)Gang Nie, Lu Tang, Yajie Zhang, Linkai Huang, Xiao Ma, Xin Cao, Ling Pan, Xu Zhang, Xinquan Zhang*. Development of SSR Markers Based on Transcriptome Sequencing and Association Analysis with Drought Tolerance in Perennial Grass Miscanthus from China. Front. Plant Sci. 2017, 8: 801. doi: 10.3389/fpls.2017.00801 (JCR Q2, IF=3.677)
25)Gang Nie, Ming Sun, Linkai Huang, Xiao Ma, Xinquan Zhang*. Effect of moist pre-chill and dry pre-heat treatment on the germination of Miscanthus sinensis seed from southwest China. Grassland Science, 2017, 63: 93-100. doi: 10.1111/grs.12152 (JCR Q4, IF=0.820)
26)Gang Nie, Linkai Huang, Xinquan Zhang*, Megan Taylor, Yiwei Jiang, Xiaoqing Yu, Xinchun Liu, Xinyu Wang, Yajie Zhang. Marker-Trait Association for Biomass Yield of Potential Bio-fuel Feedstock Miscanthus sinensis from Southwest China. Front. Plant Sci. 2016, 7:802. doi: 10.3389/fpls.2016.00802 （JCR Q2, IF=4.495）
27)Gang Nie, Xinquan Zhang*, Linkai Huang, Wenzhi Xu, Jian-Ping Wang, Yun-Wei Zhang, Xiao Ma, Yan-Hong Yan, Hai-Dong Yan. Genetic Varibility and Population Structure of the Potential Bioenergy Crop Miscanthus sinensis (Poaceae) in Southwest China Based on SRAP Makers. Molecules, 2014, 19:12881-12897. doi: 10.3389/fpls.2016.00802 (JCR Q3, IF=2.465)